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Cluster: CGMR062874_CGC83

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_34312 k141_34312_20 21519 24329 + 1.B.14.12.1
pfam k141_34312 k141_34312_21 24490 25428 + Metallophos
TC k141_34312 k141_34312_22 25565 27421 - 1.A.23.1.4
TC k141_34312 k141_34312_23 27547 28536 + 2.A.19.5.2
pfam k141_34312 k141_34312_24 28542 30110 - DUF4832 | DUF4874
CAZyme k141_34312 k141_34312_25 30333 31586 + GH154
sulfatase k141_34312 k141_34312_26 31645 32562 + S1_8
pfam k141_34312 k141_34312_27 32694 33953 - AAA_14 | DUF4143
TC k141_34312 k141_34312_28 34958 38023 + 1.B.14.6.1
TC k141_34312 k141_34312_29 38059 39687 + 8.A.46.1.3
CAZyme k141_34312 k141_34312_30 39717 41279 + GH30_6
NULL(UNKNOWN) k141_34312 k141_34312_31 41303 42481 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_34312 k141_34312_32 42674 43843 + GH130_1
TC k141_34312 k141_34312_33 44135 46012 + 2.A.21.3.8
Gene ID: k141_34312_20
Type: TC
Location: 21519 - 24329 (+)
Gene ID: k141_34312_21
Type: pfam
Location: 24490 - 25428 (+)
Gene ID: k141_34312_22
Type: TC
Location: 25565 - 27421 (-)
Gene ID: k141_34312_23
Type: TC
Location: 27547 - 28536 (+)
Gene ID: k141_34312_24
Type: pfam
Location: 28542 - 30110 (-)
Gene ID: k141_34312_25
Type: CAZyme
Location: 30333 - 31586 (+)
Gene ID: k141_34312_26
Type: sulfatase
Location: 31645 - 32562 (+)
Gene ID: k141_34312_27
Type: pfam
Location: 32694 - 33953 (-)
Gene ID: k141_34312_28
Type: TC
Location: 34958 - 38023 (+)
Gene ID: k141_34312_29
Type: TC
Location: 38059 - 39687 (+)
Gene ID: k141_34312_30
Type: CAZyme
Location: 39717 - 41279 (+)
Gene ID: k141_34312_31
Type:
Location: 41303 - 42481 (+)
Gene ID: k141_34312_32
Type: CAZyme
Location: 42674 - 43843 (+)
Gene ID: k141_34312_33
Type: TC
Location: 44135 - 46012 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_34312_24 vegetarian > vegan 1.00383 0.02546
k141_34312_25 vegetarian > omnivore 1.26834 0.00993
k141_34312_25 vegetarian > vegan 1.22763 0.02213

🧭 Explore Read Mapping of CGC

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