Cluster: CGMR062874_CGC80
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR062874
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_79609 | k141_79609_120 | 168558 | 171836 | - | 1.B.14.6.1 |
| CAZyme | k141_79609 | k141_79609_121 | 171984 | 173735 | - | GH30 |
| TF | k141_79609 | k141_79609_122 | 173933 | 177898 | - | HTH_AraC |
| NULL(UNKNOWN) | k141_79609 | k141_79609_123 | 178117 | 178584 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_79609 | k141_79609_124 | 178836 | 180914 | + | GH43_35 |
Gene ID: k141_79609_120
Type: TC
Location: 168558 - 171836 (-)
Type: TC
Location: 168558 - 171836 (-)
Gene ID: k141_79609_121
Type: CAZyme
Location: 171984 - 173735 (-)
Type: CAZyme
Location: 171984 - 173735 (-)
Gene ID: k141_79609_122
Type: TF
Location: 173933 - 177898 (-)
Type: TF
Location: 173933 - 177898 (-)
Gene ID: k141_79609_123
Type:
Location: 178117 - 178584 (+)
Type:
Location: 178117 - 178584 (+)
Gene ID: k141_79609_124
Type: CAZyme
Location: 178836 - 180914 (+)
Type: CAZyme
Location: 178836 - 180914 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_79609_120 | vegan > omnivore | 3.13971 | 0.00029 |
| k141_79609_120 | vegetarian > omnivore | 1.33797 | 0.00993 |
| k141_79609_121 | vegan > omnivore | 2.95908 | 0.00029 |
| k141_79609_121 | vegetarian > omnivore | 1.83890 | 0.00993 |
| k141_79609_122 | vegan > omnivore | 3.38418 | 0.00029 |
| k141_79609_122 | vegetarian > omnivore | 2.24650 | 0.00993 |
| k141_79609_123 | vegan > omnivore | 4.05609 | 0.00029 |
| k141_79609_123 | vegetarian > omnivore | 2.46617 | 0.00993 |