Cluster: CGMR062874_CGC73
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR062874
- CGC Family ID: CGCFAM_00361
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_116790 | k141_116790_1 | 346 | 1920 | - | GH28 |
| CAZyme | k141_116790 | k141_116790_2 | 1947 | 4358 | - | CE8 |
| pfam | k141_116790 | k141_116790_3 | 4400 | 6256 | - | Mfa_like_1 |
| pfam | k141_116790 | k141_116790_4 | 6312 | 7964 | - | DUF5123 |
| TC | k141_116790 | k141_116790_5 | 7985 | 9886 | - | 8.A.46.1.3 |
| TC | k141_116790 | k141_116790_6 | 9912 | 13124 | - | 1.B.14.6.1 |
| CAZyme | k141_116790 | k141_116790_7 | 13169 | 15556 | - | PL1_2 |
| pfam | k141_116790 | k141_116790_8 | 15591 | 17396 | - | DUF5123 |
| NULL(UNKNOWN) | k141_116790 | k141_116790_9 | 17410 | 18297 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_116790 | k141_116790_10 | 18690 | 20219 | - | PL1_2 |
Gene ID: k141_116790_1
Type: CAZyme
Location: 346 - 1920 (-)
Type: CAZyme
Location: 346 - 1920 (-)
Gene ID: k141_116790_2
Type: CAZyme
Location: 1947 - 4358 (-)
Type: CAZyme
Location: 1947 - 4358 (-)
Gene ID: k141_116790_3
Type: pfam
Location: 4400 - 6256 (-)
Type: pfam
Location: 4400 - 6256 (-)
Gene ID: k141_116790_4
Type: pfam
Location: 6312 - 7964 (-)
Type: pfam
Location: 6312 - 7964 (-)
Gene ID: k141_116790_5
Type: TC
Location: 7985 - 9886 (-)
Type: TC
Location: 7985 - 9886 (-)
Gene ID: k141_116790_6
Type: TC
Location: 9912 - 13124 (-)
Type: TC
Location: 9912 - 13124 (-)
Gene ID: k141_116790_7
Type: CAZyme
Location: 13169 - 15556 (-)
Type: CAZyme
Location: 13169 - 15556 (-)
Gene ID: k141_116790_8
Type: pfam
Location: 15591 - 17396 (-)
Type: pfam
Location: 15591 - 17396 (-)
Gene ID: k141_116790_9
Type:
Location: 17410 - 18297 (-)
Type:
Location: 17410 - 18297 (-)
Gene ID: k141_116790_10
Type: CAZyme
Location: 18690 - 20219 (-)
Type: CAZyme
Location: 18690 - 20219 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_116790_2 | vegan > omnivore | 1.90221 | 0.00029 |
| k141_116790_3 | vegan > omnivore | 1.56721 | 0.00029 |
| k141_116790_4 | vegan > omnivore | 1.41743 | 0.00029 |
| k141_116790_6 | vegan > omnivore | 1.28056 | 0.00029 |
| k141_116790_7 | vegan > omnivore | 1.73847 | 0.00029 |
| k141_116790_8 | vegan > omnivore | 2.30862 | 0.00029 |
| k141_116790_8 | vegetarian > omnivore | 1.44741 | 0.00723 |
| k141_116790_9 | vegan > omnivore | 3.65417 | 0.00029 |
| k141_116790_9 | vegetarian > omnivore | 2.40314 | 0.00717 |
| k141_116790_10 | vegan > omnivore | 1.12044 | 0.00029 |