Cluster: CGMR062874_CGC67
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR062874
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_119652 | k141_119652_1 | 293 | 1672 | - | 2.A.6.2.20 |
| TC | k141_119652 | k141_119652_2 | 1672 | 4776 | - | 2.A.6.2.25 |
| TC | k141_119652 | k141_119652_3 | 4780 | 5988 | - | 2.A.6.2.29 |
| pfam | k141_119652 | k141_119652_4 | 6260 | 8476 | + | Patatin | Omp85_2 |
| pfam | k141_119652 | k141_119652_5 | 8581 | 10128 | + | PDDEXK_9 | AAA-ATPase_like |
| CAZyme | k141_119652 | k141_119652_6 | 10258 | 11748 | - | CBM32 |
| CAZyme | k141_119652 | k141_119652_7 | 11763 | 12605 | - | GH35 |
| CAZyme | k141_119652 | k141_119652_8 | 12932 | 14293 | - | GH28 |
| CAZyme | k141_119652 | k141_119652_9 | 14294 | 15553 | - | GH154 |
| CAZyme | k141_119652 | k141_119652_10 | 15578 | 16750 | - | GH105 |
Gene ID: k141_119652_1
Type: TC
Location: 293 - 1672 (-)
Type: TC
Location: 293 - 1672 (-)
Gene ID: k141_119652_2
Type: TC
Location: 1672 - 4776 (-)
Type: TC
Location: 1672 - 4776 (-)
Gene ID: k141_119652_3
Type: TC
Location: 4780 - 5988 (-)
Type: TC
Location: 4780 - 5988 (-)
Gene ID: k141_119652_4
Type: pfam
Location: 6260 - 8476 (+)
Type: pfam
Location: 6260 - 8476 (+)
Gene ID: k141_119652_5
Type: pfam
Location: 8581 - 10128 (+)
Type: pfam
Location: 8581 - 10128 (+)
Gene ID: k141_119652_6
Type: CAZyme
Location: 10258 - 11748 (-)
Type: CAZyme
Location: 10258 - 11748 (-)
Gene ID: k141_119652_7
Type: CAZyme
Location: 11763 - 12605 (-)
Type: CAZyme
Location: 11763 - 12605 (-)
Gene ID: k141_119652_8
Type: CAZyme
Location: 12932 - 14293 (-)
Type: CAZyme
Location: 12932 - 14293 (-)
Gene ID: k141_119652_9
Type: CAZyme
Location: 14294 - 15553 (-)
Type: CAZyme
Location: 14294 - 15553 (-)
Gene ID: k141_119652_10
Type: CAZyme
Location: 15578 - 16750 (-)
Type: CAZyme
Location: 15578 - 16750 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_119652_7 | vegan > omnivore | 1.13527 | 0.00029 |
| k141_119652_8 | vegan > omnivore | 2.98230 | 0.00029 |
| k141_119652_8 | vegetarian > omnivore | 2.51170 | 0.00717 |
| k141_119652_9 | vegan > omnivore | 1.69242 | 0.00029 |
| k141_119652_10 | vegan > omnivore | 2.17664 | 0.00029 |
| k141_119652_10 | vegetarian > omnivore | 1.11370 | 0.00993 |