Cluster: CGMR062874_CGC66
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR062874
- CGC Family ID: CGCFAM_04413
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_27264 | k141_27264_9 | 10137 | 12614 | - | 1.B.14.6.5 |
| pfam | k141_27264 | k141_27264_10 | 12848 | 13396 | - | Hexapep | Mac | Hexapep_2 |
| NULL(UNKNOWN) | k141_27264 | k141_27264_11 | 13459 | 14004 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_27264 | k141_27264_12 | 14196 | 16277 | - | GH3 |
| pfam | k141_27264 | k141_27264_13 | 16340 | 17911 | - | PKD | PKD | Laminin_G_3 | PKD_4 | PKD_4 |
| NULL(UNKNOWN) | k141_27264 | k141_27264_14 | 18031 | 18213 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_27264 | k141_27264_15 | 18210 | 19370 | - | GH33 |
| TC | k141_27264 | k141_27264_16 | 19357 | 20622 | - | 8.A.46.1.1 |
Gene ID: k141_27264_9
Type: TC
Location: 10137 - 12614 (-)
Type: TC
Location: 10137 - 12614 (-)
Gene ID: k141_27264_10
Type: pfam
Location: 12848 - 13396 (-)
Type: pfam
Location: 12848 - 13396 (-)
Gene ID: k141_27264_11
Type:
Location: 13459 - 14004 (-)
Type:
Location: 13459 - 14004 (-)
Gene ID: k141_27264_12
Type: CAZyme
Location: 14196 - 16277 (-)
Type: CAZyme
Location: 14196 - 16277 (-)
Gene ID: k141_27264_13
Type: pfam
Location: 16340 - 17911 (-)
Type: pfam
Location: 16340 - 17911 (-)
Gene ID: k141_27264_14
Type:
Location: 18031 - 18213 (-)
Type:
Location: 18031 - 18213 (-)
Gene ID: k141_27264_15
Type: CAZyme
Location: 18210 - 19370 (-)
Type: CAZyme
Location: 18210 - 19370 (-)
Gene ID: k141_27264_16
Type: TC
Location: 19357 - 20622 (-)
Type: TC
Location: 19357 - 20622 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_27264_10 | vegetarian > omnivore | 1.13030 | 0.00993 |
| k141_27264_11 | vegan > omnivore | 1.25005 | 0.00029 |
| k141_27264_12 | vegan > omnivore | 1.18750 | 0.00029 |
| k141_27264_13 | vegetarian > omnivore | 1.01647 | 0.00993 |
| k141_27264_13 | vegan > omnivore | 1.69196 | 0.00029 |
| k141_27264_14 | vegetarian > omnivore | 1.22464 | 0.00993 |
| k141_27264_14 | vegan > omnivore | 1.73236 | 0.00029 |
| k141_27264_15 | vegan > omnivore | 1.51175 | 0.00029 |
| k141_27264_16 | vegan > omnivore | 2.05017 | 0.00029 |
| k141_27264_16 | vegetarian > omnivore | 1.32131 | 0.00717 |