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Cluster: CGMR062874_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_131816 k141_131816_49 84602 85789 + CE15
TC k141_131816 k141_131816_50 85958 89107 + 1.B.14.6.1
pfam k141_131816 k141_131816_51 89120 90754 + SusD_RagB | SusD-like_3
pfam k141_131816 k141_131816_52 90774 92471 + DUF5018
CAZyme k141_131816 k141_131816_53 92513 94081 + GH26
CAZyme k141_131816 k141_131816_54 94105 96309 + GH3
TC k141_131816 k141_131816_55 96316 97632 + 2.A.1.7.9
CAZyme k141_131816 k141_131816_56 97650 98837 + CE9
Gene ID: k141_131816_49
Type: CAZyme
Location: 84602 - 85789 (+)
Gene ID: k141_131816_50
Type: TC
Location: 85958 - 89107 (+)
Gene ID: k141_131816_51
Type: pfam
Location: 89120 - 90754 (+)
Gene ID: k141_131816_52
Type: pfam
Location: 90774 - 92471 (+)
Gene ID: k141_131816_53
Type: CAZyme
Location: 92513 - 94081 (+)
Gene ID: k141_131816_54
Type: CAZyme
Location: 94105 - 96309 (+)
Gene ID: k141_131816_55
Type: TC
Location: 96316 - 97632 (+)
Gene ID: k141_131816_56
Type: CAZyme
Location: 97650 - 98837 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_131816_49 vegetarian > omnivore 1.00806 0.00993
k141_131816_51 vegetarian > omnivore 1.15270 0.00993
k141_131816_54 vegetarian > omnivore 1.07819 0.00993

🧭 Explore Read Mapping of CGC

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