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Cluster: CGMR062874_CGC57

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_15908 k141_15908_15 11703 14810 - 2.A.6.1.6
TC k141_15908 k141_15908_16 14817 15902 - 2.A.6.1.4
TC k141_15908 k141_15908_17 16355 17563 + 2.A.1.21.22
NULL(UNKNOWN) k141_15908 k141_15908_18 17668 18291 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_15908 k141_15908_19 18504 20633 + 2.A.37.2.5
CAZyme k141_15908 k141_15908_20 20735 22003 - CE17
CAZyme k141_15908 k141_15908_21 22015 23775 - GH3
TF k141_15908 k141_15908_22 23993 28069 + HTH_AraC
pfam k141_15908 k141_15908_23 28141 29856 - SusD_RagB | SusD-like_3
TC k141_15908 k141_15908_24 29873 33034 - 1.B.14.6.1
Gene ID: k141_15908_15
Type: TC
Location: 11703 - 14810 (-)
Gene ID: k141_15908_16
Type: TC
Location: 14817 - 15902 (-)
Gene ID: k141_15908_17
Type: TC
Location: 16355 - 17563 (+)
Gene ID: k141_15908_18
Type:
Location: 17668 - 18291 (-)
Gene ID: k141_15908_19
Type: TC
Location: 18504 - 20633 (+)
Gene ID: k141_15908_20
Type: CAZyme
Location: 20735 - 22003 (-)
Gene ID: k141_15908_21
Type: CAZyme
Location: 22015 - 23775 (-)
Gene ID: k141_15908_22
Type: TF
Location: 23993 - 28069 (+)
Gene ID: k141_15908_23
Type: pfam
Location: 28141 - 29856 (-)
Gene ID: k141_15908_24
Type: TC
Location: 29873 - 33034 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_15908_17 vegan > omnivore 1.44172 0.00029
k141_15908_22 vegan > omnivore 1.01163 0.00029
k141_15908_23 vegan > omnivore 1.32836 0.00029

🧭 Explore Read Mapping of CGC

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