Cluster: CGMR062874_CGC52
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR062874
- CGC Family ID: CGCFAM_04408
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_76802 | k141_76802_45 | 66925 | 68976 | + | 1.B.14.15.2 |
| STP | k141_76802 | k141_76802_46 | 68994 | 69833 | + | SBP_bac_3 |
| TF | k141_76802 | k141_76802_47 | 69820 | 73998 | + | HTH_AraC | HTH_AraC |
| CAZyme | k141_76802 | k141_76802_48 | 74318 | 75562 | + | GH88 |
| CAZyme | k141_76802 | k141_76802_49 | 75584 | 78061 | + | GH2 |
| CAZyme | k141_76802 | k141_76802_50 | 78058 | 79230 | + | PL38 |
| CAZyme | k141_76802 | k141_76802_51 | 79252 | 80454 | + | PL38 |
| TC | k141_76802 | k141_76802_52 | 80478 | 83585 | + | 1.B.14.6.1 |
Gene ID: k141_76802_45
Type: TC
Location: 66925 - 68976 (+)
Type: TC
Location: 66925 - 68976 (+)
Gene ID: k141_76802_46
Type: STP
Location: 68994 - 69833 (+)
Type: STP
Location: 68994 - 69833 (+)
Gene ID: k141_76802_47
Type: TF
Location: 69820 - 73998 (+)
Type: TF
Location: 69820 - 73998 (+)
Gene ID: k141_76802_48
Type: CAZyme
Location: 74318 - 75562 (+)
Type: CAZyme
Location: 74318 - 75562 (+)
Gene ID: k141_76802_49
Type: CAZyme
Location: 75584 - 78061 (+)
Type: CAZyme
Location: 75584 - 78061 (+)
Gene ID: k141_76802_50
Type: CAZyme
Location: 78058 - 79230 (+)
Type: CAZyme
Location: 78058 - 79230 (+)
Gene ID: k141_76802_51
Type: CAZyme
Location: 79252 - 80454 (+)
Type: CAZyme
Location: 79252 - 80454 (+)
Gene ID: k141_76802_52
Type: TC
Location: 80478 - 83585 (+)
Type: TC
Location: 80478 - 83585 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_76802_48 | vegan > omnivore | 1.87749 | 0.00029 |
| k141_76802_48 | vegetarian > omnivore | 2.13840 | 0.00993 |
| k141_76802_49 | vegan > omnivore | 1.69289 | 0.00029 |
| k141_76802_49 | vegetarian > omnivore | 1.36152 | 0.00993 |
| k141_76802_50 | vegan > omnivore | 1.48079 | 0.00029 |
| k141_76802_50 | vegetarian > omnivore | 1.09543 | 0.00993 |
| k141_76802_51 | vegetarian > omnivore | 2.93759 | 0.00717 |
| k141_76802_51 | vegan > omnivore | 2.42049 | 0.00029 |
| k141_76802_52 | vegetarian > omnivore | 1.12651 | 0.00993 |
| k141_76802_52 | vegan > omnivore | 1.19042 | 0.00029 |