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Cluster: CGMR062874_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_35448 k141_35448_1 1 354 + 3.A.2.3.3
pfam k141_35448 k141_35448_2 398 1003 + ATP-synt_D
TC k141_35448 k141_35448_3 1000 2817 + 3.A.2.2.2
TC k141_35448 k141_35448_4 2891 3355 + 3.A.2.2.2
CAZyme k141_35448 k141_35448_5 3558 5219 + GT3
CAZyme k141_35448 k141_35448_6 5257 7821 + GT35
pfam k141_35448 k141_35448_7 8052 9155 - Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_2 | Thioredoxin_8 | DUF4369
TC k141_35448 k141_35448_8 9294 10685 + 3.A.1.11.8
TC k141_35448 k141_35448_9 10697 11497 + 3.A.1.11.8
TC k141_35448 k141_35448_10 11491 12285 + 3.A.1.11.8
Gene ID: k141_35448_1
Type: TC
Location: 1 - 354 (+)
Gene ID: k141_35448_2
Type: pfam
Location: 398 - 1003 (+)
Gene ID: k141_35448_3
Type: TC
Location: 1000 - 2817 (+)
Gene ID: k141_35448_4
Type: TC
Location: 2891 - 3355 (+)
Gene ID: k141_35448_5
Type: CAZyme
Location: 3558 - 5219 (+)
Gene ID: k141_35448_6
Type: CAZyme
Location: 5257 - 7821 (+)
Gene ID: k141_35448_7
Type: pfam
Location: 8052 - 9155 (-)
Gene ID: k141_35448_8
Type: TC
Location: 9294 - 10685 (+)
Gene ID: k141_35448_9
Type: TC
Location: 10697 - 11497 (+)
Gene ID: k141_35448_10
Type: TC
Location: 11491 - 12285 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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