Cluster: CGMR062874_CGC3
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 5
- Substrate: host glycan
- Genome ID: CGMR062874
- CGC Family ID: CGCFAM_00479
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_120868 | k141_120868_2 | 1245 | 2213 | - | GH130_2 |
| pfam | k141_120868 | k141_120868_3 | 2206 | 3558 | - | MFS_1 | MFS_1 |
| CAZyme | k141_120868 | k141_120868_4 | 3656 | 5860 | - | GH163 |
| pfam | k141_120868 | k141_120868_5 | 5986 | 7335 | - | BT_3987-like_N | BT_3987-like_N | DUF4999 |
| pfam | k141_120868 | k141_120868_6 | 7352 | 8536 | - | BT_3987-like_N | Laminin_G_3 |
| CAZyme | k141_120868 | k141_120868_7 | 8582 | 9604 | - | GH18 |
| TC | k141_120868 | k141_120868_8 | 9631 | 11217 | - | 8.A.46.2.1 |
| TC | k141_120868 | k141_120868_9 | 11226 | 14048 | - | 1.B.14.6.13 |
| NULL(UNKNOWN) | k141_120868 | k141_120868_10 | 14214 | 14348 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_120868 | k141_120868_11 | 14280 | 15461 | - | BT_3987-like_N | Laminin_G_3 |
| CAZyme | k141_120868 | k141_120868_12 | 15482 | 16612 | - | GH18 |
| TC | k141_120868 | k141_120868_13 | 16655 | 18292 | - | 8.A.46.2.2 |
| TC | k141_120868 | k141_120868_14 | 18315 | 21617 | - | 1.B.14.6.13 |
| NULL(UNKNOWN) | k141_120868 | k141_120868_15 | 21660 | 21761 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_120868 | k141_120868_16 | 21996 | 23231 | + | Phage_integrase | Phage_int_SAM_5 | Arm-DNA-bind_5 |
| TC | k141_120868 | k141_120868_17 | 23489 | 26233 | + | 1.B.14.6.13 |
| TC | k141_120868 | k141_120868_18 | 26251 | 27801 | + | 8.A.46.2.1 |
| CAZyme | k141_120868 | k141_120868_19 | 27830 | 28963 | + | GH18 |
Gene ID: k141_120868_2
Type: CAZyme
Location: 1245 - 2213 (-)
Type: CAZyme
Location: 1245 - 2213 (-)
Gene ID: k141_120868_3
Type: pfam
Location: 2206 - 3558 (-)
Type: pfam
Location: 2206 - 3558 (-)
Gene ID: k141_120868_4
Type: CAZyme
Location: 3656 - 5860 (-)
Type: CAZyme
Location: 3656 - 5860 (-)
Gene ID: k141_120868_5
Type: pfam
Location: 5986 - 7335 (-)
Type: pfam
Location: 5986 - 7335 (-)
Gene ID: k141_120868_6
Type: pfam
Location: 7352 - 8536 (-)
Type: pfam
Location: 7352 - 8536 (-)
Gene ID: k141_120868_7
Type: CAZyme
Location: 8582 - 9604 (-)
Type: CAZyme
Location: 8582 - 9604 (-)
Gene ID: k141_120868_8
Type: TC
Location: 9631 - 11217 (-)
Type: TC
Location: 9631 - 11217 (-)
Gene ID: k141_120868_9
Type: TC
Location: 11226 - 14048 (-)
Type: TC
Location: 11226 - 14048 (-)
Gene ID: k141_120868_10
Type:
Location: 14214 - 14348 (+)
Type:
Location: 14214 - 14348 (+)
Gene ID: k141_120868_11
Type: pfam
Location: 14280 - 15461 (-)
Type: pfam
Location: 14280 - 15461 (-)
Gene ID: k141_120868_12
Type: CAZyme
Location: 15482 - 16612 (-)
Type: CAZyme
Location: 15482 - 16612 (-)
Gene ID: k141_120868_13
Type: TC
Location: 16655 - 18292 (-)
Type: TC
Location: 16655 - 18292 (-)
Gene ID: k141_120868_14
Type: TC
Location: 18315 - 21617 (-)
Type: TC
Location: 18315 - 21617 (-)
Gene ID: k141_120868_15
Type:
Location: 21660 - 21761 (-)
Type:
Location: 21660 - 21761 (-)
Gene ID: k141_120868_16
Type: pfam
Location: 21996 - 23231 (+)
Type: pfam
Location: 21996 - 23231 (+)
Gene ID: k141_120868_17
Type: TC
Location: 23489 - 26233 (+)
Type: TC
Location: 23489 - 26233 (+)
Gene ID: k141_120868_18
Type: TC
Location: 26251 - 27801 (+)
Type: TC
Location: 26251 - 27801 (+)
Gene ID: k141_120868_19
Type: CAZyme
Location: 27830 - 28963 (+)
Type: CAZyme
Location: 27830 - 28963 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_120868_15 | vegan > omnivore | 1.09070 | 0.00029 |
| k141_120868_19 | vegetarian > omnivore | 1.08172 | 0.00993 |