Cluster: CGMR062874_CGC29
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR062874
- CGC Family ID: CGCFAM_01744
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_57818 | k141_57818_10 | 17720 | 20746 | - | 1.B.14.6.1 |
| pfam | k141_57818 | k141_57818_11 | 20765 | 22603 | - | SusD_RagB | SusD-like_3 |
| TC | k141_57818 | k141_57818_12 | 22623 | 25862 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | k141_57818 | k141_57818_13 | 25891 | 27639 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_57818 | k141_57818_14 | 27677 | 31186 | - | GH173 | GH36 |
| CAZyme | k141_57818 | k141_57818_15 | 31183 | 33282 | - | GH36 |
| TC | k141_57818 | k141_57818_16 | 33295 | 34410 | - | 2.A.1.7.17 |
| CAZyme | k141_57818 | k141_57818_17 | 34477 | 36066 | - | GH173 |
| STP | k141_57818 | k141_57818_18 | 36100 | 36678 | - | SIS |
| pfam | k141_57818 | k141_57818_19 | 36684 | 37652 | - | ROK |
| CAZyme | k141_57818 | k141_57818_20 | 37658 | 40123 | - | GH2 |
| CAZyme | k141_57818 | k141_57818_21 | 40185 | 42821 | - | CBM67 | GH78 |
Gene ID: k141_57818_10
Type: TC
Location: 17720 - 20746 (-)
Type: TC
Location: 17720 - 20746 (-)
Gene ID: k141_57818_11
Type: pfam
Location: 20765 - 22603 (-)
Type: pfam
Location: 20765 - 22603 (-)
Gene ID: k141_57818_12
Type: TC
Location: 22623 - 25862 (-)
Type: TC
Location: 22623 - 25862 (-)
Gene ID: k141_57818_13
Type:
Location: 25891 - 27639 (-)
Type:
Location: 25891 - 27639 (-)
Gene ID: k141_57818_14
Type: CAZyme
Location: 27677 - 31186 (-)
Type: CAZyme
Location: 27677 - 31186 (-)
Gene ID: k141_57818_15
Type: CAZyme
Location: 31183 - 33282 (-)
Type: CAZyme
Location: 31183 - 33282 (-)
Gene ID: k141_57818_16
Type: TC
Location: 33295 - 34410 (-)
Type: TC
Location: 33295 - 34410 (-)
Gene ID: k141_57818_17
Type: CAZyme
Location: 34477 - 36066 (-)
Type: CAZyme
Location: 34477 - 36066 (-)
Gene ID: k141_57818_18
Type: STP
Location: 36100 - 36678 (-)
Type: STP
Location: 36100 - 36678 (-)
Gene ID: k141_57818_19
Type: pfam
Location: 36684 - 37652 (-)
Type: pfam
Location: 36684 - 37652 (-)
Gene ID: k141_57818_20
Type: CAZyme
Location: 37658 - 40123 (-)
Type: CAZyme
Location: 37658 - 40123 (-)
Gene ID: k141_57818_21
Type: CAZyme
Location: 40185 - 42821 (-)
Type: CAZyme
Location: 40185 - 42821 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_57818_10 | vegetarian > vegan | 1.15070 | 0.02213 |
| k141_57818_11 | vegetarian > vegan | 1.13932 | 0.03132 |
| k141_57818_12 | vegetarian > vegan | 1.33027 | 0.02213 |
| k141_57818_14 | vegetarian > vegan | 1.36880 | 0.02213 |
| k141_57818_15 | vegetarian > omnivore | 1.07112 | 0.00993 |
| k141_57818_15 | vegetarian > vegan | 1.15135 | 0.04277 |
| k141_57818_16 | vegetarian > vegan | 1.23808 | 0.02213 |
| k141_57818_17 | vegetarian > vegan | 1.50100 | 0.02213 |
| k141_57818_18 | vegetarian > omnivore | 1.12306 | 0.00993 |
| k141_57818_18 | vegetarian > vegan | 1.64596 | 0.02213 |
| k141_57818_19 | vegetarian > vegan | 1.35698 | 0.02213 |
| k141_57818_20 | vegetarian > vegan | 1.23785 | 0.04687 |
| k141_57818_20 | vegetarian > omnivore | 1.04439 | 0.00993 |
| k141_57818_21 | vegetarian > vegan | 1.37673 | 0.02315 |