Cluster: CGMR062874_CGC11
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR062874
- CGC Family ID: CGCFAM_00372
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_39695 | k141_39695_3 | 1360 | 2163 | - | 9.B.171.1.2 |
| CAZyme | k141_39695 | k141_39695_4 | 2181 | 4787 | - | PL15_2 |
| TC | k141_39695 | k141_39695_5 | 4796 | 6499 | - | 8.A.46.1.3 |
| TC | k141_39695 | k141_39695_6 | 6522 | 9701 | - | 1.B.14.6.1 |
| CAZyme | k141_39695 | k141_39695_7 | 10116 | 11297 | + | GH88 |
| TF | k141_39695 | k141_39695_8 | 11416 | 15513 | + | HTH_AraC |
| CAZyme | k141_39695 | k141_39695_9 | 15840 | 18392 | + | PL15_2 |
| TC | k141_39695 | k141_39695_10 | 18419 | 19156 | + | 9.B.171.1.2 |
| pfam | k141_39695 | k141_39695_11 | 19194 | 20204 | + | DUF6562 |
| NULL(UNKNOWN) | k141_39695 | k141_39695_12 | 20253 | 21803 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_39695 | k141_39695_13 | 21929 | 24475 | + | PL15 |
| TC | k141_39695 | k141_39695_14 | 24516 | 27731 | + | 1.B.14.6.1 |
| TC | k141_39695 | k141_39695_15 | 27753 | 29447 | + | 8.A.46.1.3 |
Gene ID: k141_39695_3
Type: TC
Location: 1360 - 2163 (-)
Type: TC
Location: 1360 - 2163 (-)
Gene ID: k141_39695_4
Type: CAZyme
Location: 2181 - 4787 (-)
Type: CAZyme
Location: 2181 - 4787 (-)
Gene ID: k141_39695_5
Type: TC
Location: 4796 - 6499 (-)
Type: TC
Location: 4796 - 6499 (-)
Gene ID: k141_39695_6
Type: TC
Location: 6522 - 9701 (-)
Type: TC
Location: 6522 - 9701 (-)
Gene ID: k141_39695_7
Type: CAZyme
Location: 10116 - 11297 (+)
Type: CAZyme
Location: 10116 - 11297 (+)
Gene ID: k141_39695_8
Type: TF
Location: 11416 - 15513 (+)
Type: TF
Location: 11416 - 15513 (+)
Gene ID: k141_39695_9
Type: CAZyme
Location: 15840 - 18392 (+)
Type: CAZyme
Location: 15840 - 18392 (+)
Gene ID: k141_39695_10
Type: TC
Location: 18419 - 19156 (+)
Type: TC
Location: 18419 - 19156 (+)
Gene ID: k141_39695_11
Type: pfam
Location: 19194 - 20204 (+)
Type: pfam
Location: 19194 - 20204 (+)
Gene ID: k141_39695_12
Type:
Location: 20253 - 21803 (+)
Type:
Location: 20253 - 21803 (+)
Gene ID: k141_39695_13
Type: CAZyme
Location: 21929 - 24475 (+)
Type: CAZyme
Location: 21929 - 24475 (+)
Gene ID: k141_39695_14
Type: TC
Location: 24516 - 27731 (+)
Type: TC
Location: 24516 - 27731 (+)
Gene ID: k141_39695_15
Type: TC
Location: 27753 - 29447 (+)
Type: TC
Location: 27753 - 29447 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_39695_12 | vegetarian > omnivore | 1.13502 | 0.00993 |