Cluster: CGMR062874_CGC101
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR062874
- CGC Family ID: CGCFAM_01310
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_59816 | k141_59816_31 | 42061 | 46386 | + | 2.A.6.1.2 |
| pfam | k141_59816 | k141_59816_32 | 46411 | 47343 | + | HlyD_3 | HlyD_D23 |
| TC | k141_59816 | k141_59816_33 | 47414 | 48481 | + | 9.B.33.1.1 |
| TF | k141_59816 | k141_59816_34 | 48497 | 49294 | + | LytTR |
| CAZyme | k141_59816 | k141_59816_35 | 49394 | 51340 | - | GH97 |
| CAZyme | k141_59816 | k141_59816_36 | 51402 | 53735 | - | GH92 |
| pfam | k141_59816 | k141_59816_37 | 53748 | 54542 | - | BSP |
| CAZyme | k141_59816 | k141_59816_38 | 54555 | 56900 | - | GH92 |
| CAZyme | k141_59816 | k141_59816_39 | 56995 | 58386 | - | GH29 |
Gene ID: k141_59816_31
Type: TC
Location: 42061 - 46386 (+)
Type: TC
Location: 42061 - 46386 (+)
Gene ID: k141_59816_32
Type: pfam
Location: 46411 - 47343 (+)
Type: pfam
Location: 46411 - 47343 (+)
Gene ID: k141_59816_33
Type: TC
Location: 47414 - 48481 (+)
Type: TC
Location: 47414 - 48481 (+)
Gene ID: k141_59816_34
Type: TF
Location: 48497 - 49294 (+)
Type: TF
Location: 48497 - 49294 (+)
Gene ID: k141_59816_35
Type: CAZyme
Location: 49394 - 51340 (-)
Type: CAZyme
Location: 49394 - 51340 (-)
Gene ID: k141_59816_36
Type: CAZyme
Location: 51402 - 53735 (-)
Type: CAZyme
Location: 51402 - 53735 (-)
Gene ID: k141_59816_37
Type: pfam
Location: 53748 - 54542 (-)
Type: pfam
Location: 53748 - 54542 (-)
Gene ID: k141_59816_38
Type: CAZyme
Location: 54555 - 56900 (-)
Type: CAZyme
Location: 54555 - 56900 (-)
Gene ID: k141_59816_39
Type: CAZyme
Location: 56995 - 58386 (-)
Type: CAZyme
Location: 56995 - 58386 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_59816_33 | vegan > omnivore | 1.10913 | 0.00029 |
| k141_59816_33 | vegetarian > omnivore | 1.79821 | 0.00717 |
| k141_59816_37 | vegan > omnivore | 1.23157 | 0.00029 |
| k141_59816_37 | vegetarian > omnivore | 1.01842 | 0.00717 |