Cluster: CGMR061836_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR061836
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_10252 | k141_10252_1 | 3 | 1631 | + | GH20 |
| pfam | k141_10252 | k141_10252_2 | 1635 | 2579 | + | NAGPA |
| pfam | k141_10252 | k141_10252_3 | 2598 | 3515 | + | AP_endonuc_2 |
| TC | k141_10252 | k141_10252_4 | 3810 | 5369 | + | 2.A.21.3.7 |
Gene ID: k141_10252_1
Type: CAZyme
Location: 3 - 1631 (+)
Type: CAZyme
Location: 3 - 1631 (+)
Gene ID: k141_10252_2
Type: pfam
Location: 1635 - 2579 (+)
Type: pfam
Location: 1635 - 2579 (+)
Gene ID: k141_10252_3
Type: pfam
Location: 2598 - 3515 (+)
Type: pfam
Location: 2598 - 3515 (+)
Gene ID: k141_10252_4
Type: TC
Location: 3810 - 5369 (+)
Type: TC
Location: 3810 - 5369 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Species
Pedobacter sp002399615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.