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Cluster: CGMR061816_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_216522 k141_216522_12 8832 9590 + CE1
pfam k141_216522 k141_216522_13 9636 10835 + GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
TC k141_216522 k141_216522_14 10832 11758 + 3.A.1.1.10
TC k141_216522 k141_216522_15 11776 12672 + 3.A.1.1.10
STP k141_216522 k141_216522_16 12751 14376 + SBP_bac_1
TF k141_216522 k141_216522_17 14499 15407 - 0040266
TC k141_216522 k141_216522_18 15874 17271 + 3.A.1.11.8
TC k141_216522 k141_216522_19 17261 18079 + 3.A.1.11.8
TC k141_216522 k141_216522_20 18076 18879 + 3.A.1.11.2
TC k141_216522 k141_216522_21 18916 19998 + 3.A.1.11.7
CAZyme k141_216522 k141_216522_22 20151 21251 + GT28
Gene ID: k141_216522_12
Type: CAZyme
Location: 8832 - 9590 (+)
Gene ID: k141_216522_13
Type: pfam
Location: 9636 - 10835 (+)
Gene ID: k141_216522_14
Type: TC
Location: 10832 - 11758 (+)
Gene ID: k141_216522_15
Type: TC
Location: 11776 - 12672 (+)
Gene ID: k141_216522_16
Type: STP
Location: 12751 - 14376 (+)
Gene ID: k141_216522_17
Type: TF
Location: 14499 - 15407 (-)
Gene ID: k141_216522_18
Type: TC
Location: 15874 - 17271 (+)
Gene ID: k141_216522_19
Type: TC
Location: 17261 - 18079 (+)
Gene ID: k141_216522_20
Type: TC
Location: 18076 - 18879 (+)
Gene ID: k141_216522_21
Type: TC
Location: 18916 - 19998 (+)
Gene ID: k141_216522_22
Type: CAZyme
Location: 20151 - 21251 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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