Cluster: CGMR061816_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR061816
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_39438 | k141_39438_6 | 3119 | 4687 | - | GH165 |
| pfam | k141_39438 | k141_39438_7 | 4691 | 5662 | - | Aldo_ket_red |
| CAZyme | k141_39438 | k141_39438_8 | 5672 | 6817 | - | GH33 |
| pfam | k141_39438 | k141_39438_9 | 6839 | 7651 | - | adh_short | KR | adh_short_C2 |
| TC | k141_39438 | k141_39438_10 | 7667 | 8650 | - | 3.A.1.2.15 |
| TC | k141_39438 | k141_39438_11 | 8640 | 10181 | - | 3.A.1.2.20 |
Gene ID: k141_39438_6
Type: CAZyme
Location: 3119 - 4687 (-)
Type: CAZyme
Location: 3119 - 4687 (-)
Gene ID: k141_39438_7
Type: pfam
Location: 4691 - 5662 (-)
Type: pfam
Location: 4691 - 5662 (-)
Gene ID: k141_39438_8
Type: CAZyme
Location: 5672 - 6817 (-)
Type: CAZyme
Location: 5672 - 6817 (-)
Gene ID: k141_39438_9
Type: pfam
Location: 6839 - 7651 (-)
Type: pfam
Location: 6839 - 7651 (-)
Gene ID: k141_39438_10
Type: TC
Location: 7667 - 8650 (-)
Type: TC
Location: 7667 - 8650 (-)
Gene ID: k141_39438_11
Type: TC
Location: 8640 - 10181 (-)
Type: TC
Location: 8640 - 10181 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp944386445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_39438_6 | vegetarian > omnivore | 1.68943 | 0.03127 |
| k141_39438_6 | vegetarian > vegan | 1.49430 | 0.02445 |
| k141_39438_7 | vegetarian > omnivore | 1.65134 | 0.03127 |
| k141_39438_7 | vegetarian > vegan | 2.16246 | 0.02445 |
| k141_39438_9 | vegetarian > omnivore | 1.11480 | 0.03127 |
| k141_39438_9 | vegetarian > vegan | 1.15721 | 0.02445 |
| k141_39438_10 | vegetarian > vegan | 1.35475 | 0.02445 |
| k141_39438_11 | vegetarian > omnivore | 1.18834 | 0.03127 |
| k141_39438_11 | vegetarian > vegan | 1.76901 | 0.02445 |