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Cluster: CGMR061816_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_39438 k141_39438_6 3119 4687 - GH165
pfam k141_39438 k141_39438_7 4691 5662 - Aldo_ket_red
CAZyme k141_39438 k141_39438_8 5672 6817 - GH33
pfam k141_39438 k141_39438_9 6839 7651 - adh_short | KR | adh_short_C2
TC k141_39438 k141_39438_10 7667 8650 - 3.A.1.2.15
TC k141_39438 k141_39438_11 8640 10181 - 3.A.1.2.20
Gene ID: k141_39438_6
Type: CAZyme
Location: 3119 - 4687 (-)
Gene ID: k141_39438_7
Type: pfam
Location: 4691 - 5662 (-)
Gene ID: k141_39438_8
Type: CAZyme
Location: 5672 - 6817 (-)
Gene ID: k141_39438_9
Type: pfam
Location: 6839 - 7651 (-)
Gene ID: k141_39438_10
Type: TC
Location: 7667 - 8650 (-)
Gene ID: k141_39438_11
Type: TC
Location: 8640 - 10181 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_39438_6 vegetarian > omnivore 1.68943 0.03127
k141_39438_6 vegetarian > vegan 1.49430 0.02445
k141_39438_7 vegetarian > omnivore 1.65134 0.03127
k141_39438_7 vegetarian > vegan 2.16246 0.02445
k141_39438_9 vegetarian > omnivore 1.11480 0.03127
k141_39438_9 vegetarian > vegan 1.15721 0.02445
k141_39438_10 vegetarian > vegan 1.35475 0.02445
k141_39438_11 vegetarian > omnivore 1.18834 0.03127
k141_39438_11 vegetarian > vegan 1.76901 0.02445

🧭 Explore Read Mapping of CGC

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