Cluster: CGMR061675_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR061675
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_214196 | k141_214196_29 | 27400 | 28818 | - | 3.A.5.1.1 |
| NULL(UNKNOWN) | k141_214196 | k141_214196_30 | 28852 | 29355 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_214196 | k141_214196_31 | 29340 | 30272 | - | GT2 |
Gene ID: k141_214196_29
Type: TC
Location: 27400 - 28818 (-)
Type: TC
Location: 27400 - 28818 (-)
Gene ID: k141_214196_30
Type:
Location: 28852 - 29355 (-)
Type:
Location: 28852 - 29355 (-)
Gene ID: k141_214196_31
Type: CAZyme
Location: 29340 - 30272 (-)
Type: CAZyme
Location: 29340 - 30272 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Species
Holdemanella biformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_214196_29 | vegetarian > omnivore | 1.45148 | 0.01188 |
| k141_214196_31 | vegan > omnivore | 1.13311 | 0.00457 |