Cluster: CGMR061675_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR061675
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_141499 | k141_141499_1 | 2 | 163 | + | 3.A.1.122.8 |
| TF | k141_141499 | k141_141499_2 | 826 | 1683 | + | HTH_6 |
| CAZyme | k141_141499 | k141_141499_3 | 1821 | 3212 | + | GH4 |
| sulfatase | k141_141499 | k141_141499_4 | 3202 | 4233 | + | S1_4 |
| TC | k141_141499 | k141_141499_5 | 4248 | 5855 | + | 4.A.1.1.14 |
| TC | k141_141499 | k141_141499_6 | 5855 | 6322 | + | 4.A.3.2.5 |
| TC | k141_141499 | k141_141499_7 | 6448 | 7302 | - | 2.A.115.1.5 |
Gene ID: k141_141499_1
Type: TC
Location: 2 - 163 (+)
Type: TC
Location: 2 - 163 (+)
Gene ID: k141_141499_2
Type: TF
Location: 826 - 1683 (+)
Type: TF
Location: 826 - 1683 (+)
Gene ID: k141_141499_3
Type: CAZyme
Location: 1821 - 3212 (+)
Type: CAZyme
Location: 1821 - 3212 (+)
Gene ID: k141_141499_4
Type: sulfatase
Location: 3202 - 4233 (+)
Type: sulfatase
Location: 3202 - 4233 (+)
Gene ID: k141_141499_5
Type: TC
Location: 4248 - 5855 (+)
Type: TC
Location: 4248 - 5855 (+)
Gene ID: k141_141499_6
Type: TC
Location: 5855 - 6322 (+)
Type: TC
Location: 5855 - 6322 (+)
Gene ID: k141_141499_7
Type: TC
Location: 6448 - 7302 (-)
Type: TC
Location: 6448 - 7302 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Species
Holdemanella biformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.