Cluster: CGMR061675_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR061675
- CGC Family ID: CGCFAM_03561
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_91068 | k141_91068_50 | 45620 | 47125 | - | 2.A.66.1.40 |
| pfam | k141_91068 | k141_91068_51 | 47130 | 48290 | - | Radical_SAM |
| CAZyme | k141_91068 | k141_91068_52 | 48421 | 50394 | - | GT2 |
| NULL(UNKNOWN) | k141_91068 | k141_91068_53 | 50385 | 51632 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_91068 | k141_91068_54 | 51644 | 52801 | - | Glycos_transf_1 | Glyco_trans_1_4 |
| CAZyme | k141_91068 | k141_91068_55 | 52794 | 53543 | - | GT2 |
Gene ID: k141_91068_50
Type: TC
Location: 45620 - 47125 (-)
Type: TC
Location: 45620 - 47125 (-)
Gene ID: k141_91068_51
Type: pfam
Location: 47130 - 48290 (-)
Type: pfam
Location: 47130 - 48290 (-)
Gene ID: k141_91068_52
Type: CAZyme
Location: 48421 - 50394 (-)
Type: CAZyme
Location: 48421 - 50394 (-)
Gene ID: k141_91068_53
Type:
Location: 50385 - 51632 (-)
Type:
Location: 50385 - 51632 (-)
Gene ID: k141_91068_54
Type: pfam
Location: 51644 - 52801 (-)
Type: pfam
Location: 51644 - 52801 (-)
Gene ID: k141_91068_55
Type: CAZyme
Location: 52794 - 53543 (-)
Type: CAZyme
Location: 52794 - 53543 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Species
Holdemanella biformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.