Cluster: CGMR061675_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR061675
- CGC Family ID: CGCFAM_00578
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_22302 | k141_22302_6 | 4433 | 5872 | - | GT5 |
| pfam | k141_22302 | k141_22302_7 | 5872 | 6987 | - | NTP_transferase | Hexapep_GlmU |
| pfam | k141_22302 | k141_22302_8 | 6990 | 8129 | - | NTP_transferase | Hexapep_GlmU |
| TC | k141_22302 | k141_22302_9 | 8245 | 9465 | - | 2.A.49.9.3 |
Gene ID: k141_22302_6
Type: CAZyme
Location: 4433 - 5872 (-)
Type: CAZyme
Location: 4433 - 5872 (-)
Gene ID: k141_22302_7
Type: pfam
Location: 5872 - 6987 (-)
Type: pfam
Location: 5872 - 6987 (-)
Gene ID: k141_22302_8
Type: pfam
Location: 6990 - 8129 (-)
Type: pfam
Location: 6990 - 8129 (-)
Gene ID: k141_22302_9
Type: TC
Location: 8245 - 9465 (-)
Type: TC
Location: 8245 - 9465 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Species
Holdemanella biformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_22302_9 | vegetarian > omnivore | 2.61762 | 0.01188 |