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Cluster: CGMR061239_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_5697 k141_5697_28 28008 29462 - GH1
pfam k141_5697 k141_5697_29 29478 29813 - PTS_IIA
TC k141_5697 k141_5697_30 29848 31074 - 4.A.3.2.2
pfam k141_5697 k141_5697_31 31098 31400 - PTS_IIB
pfam k141_5697 k141_5697_32 31729 32493 - Trehalase | MGH1-like_GH
CAZyme k141_5697 k141_5697_33 32659 34056 - GH63
NULL(UNKNOWN) k141_5697 k141_5697_34 34666 34938 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_5697 k141_5697_35 34990 35676 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_5697 k141_5697_36 36028 36984 - GT2
TC k141_5697 k141_5697_37 36984 38423 - 2.A.66.2.16
STP k141_5697 k141_5697_38 38458 39573 - Pyr_redox
NULL(UNKNOWN) k141_5697 k141_5697_39 39558 40709 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_5697 k141_5697_40 41312 42313 - GT113
pfam k141_5697 k141_5697_41 42356 43339 - Stealth_CR2 | Stealth_CR1 | Stealth_CR3
CAZyme k141_5697 k141_5697_42 43357 44349 - GT2
pfam k141_5697 k141_5697_43 44454 45293 - LicD
CAZyme k141_5697 k141_5697_44 45325 46089 - GT111
TC k141_5697 k141_5697_45 46108 46740 - 9.B.18.1.2
pfam k141_5697 k141_5697_46 46751 47539 - CpsB_CapC
TC k141_5697 k141_5697_47 47542 48264 - 8.A.3.2.1
TC k141_5697 k141_5697_48 48274 49053 - 8.A.3.2.4
peptidase k141_5697 k141_5697_49 49069 50190 - S12.UNW
peptidase k141_5697 k141_5697_50 50517 51230 - M10.UPA
TC k141_5697 k141_5697_51 51367 53121 - 2.A.16.2.2
Gene ID: k141_5697_28
Type: CAZyme
Location: 28008 - 29462 (-)
Gene ID: k141_5697_29
Type: pfam
Location: 29478 - 29813 (-)
Gene ID: k141_5697_30
Type: TC
Location: 29848 - 31074 (-)
Gene ID: k141_5697_31
Type: pfam
Location: 31098 - 31400 (-)
Gene ID: k141_5697_32
Type: pfam
Location: 31729 - 32493 (-)
Gene ID: k141_5697_33
Type: CAZyme
Location: 32659 - 34056 (-)
Gene ID: k141_5697_34
Type:
Location: 34666 - 34938 (+)
Gene ID: k141_5697_35
Type:
Location: 34990 - 35676 (-)
Gene ID: k141_5697_36
Type: CAZyme
Location: 36028 - 36984 (-)
Gene ID: k141_5697_37
Type: TC
Location: 36984 - 38423 (-)
Gene ID: k141_5697_38
Type: STP
Location: 38458 - 39573 (-)
Gene ID: k141_5697_39
Type:
Location: 39558 - 40709 (-)
Gene ID: k141_5697_40
Type: CAZyme
Location: 41312 - 42313 (-)
Gene ID: k141_5697_41
Type: pfam
Location: 42356 - 43339 (-)
Gene ID: k141_5697_42
Type: CAZyme
Location: 43357 - 44349 (-)
Gene ID: k141_5697_43
Type: pfam
Location: 44454 - 45293 (-)
Gene ID: k141_5697_44
Type: CAZyme
Location: 45325 - 46089 (-)
Gene ID: k141_5697_45
Type: TC
Location: 46108 - 46740 (-)
Gene ID: k141_5697_46
Type: pfam
Location: 46751 - 47539 (-)
Gene ID: k141_5697_47
Type: TC
Location: 47542 - 48264 (-)
Gene ID: k141_5697_48
Type: TC
Location: 48274 - 49053 (-)
Gene ID: k141_5697_49
Type: peptidase
Location: 49069 - 50190 (-)
Gene ID: k141_5697_50
Type: peptidase
Location: 50517 - 51230 (-)
Gene ID: k141_5697_51
Type: TC
Location: 51367 - 53121 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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