dbCAN Logo

Cluster: CGMR061239_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_39948 k141_39948_55 52315 53769 - GH1
TC k141_39948 k141_39948_56 53782 54105 - 4.A.3.2.2
TC k141_39948 k141_39948_57 54179 54490 - 4.A.3.2.4
TF k141_39948 k141_39948_58 54646 55341 + GntR
TC k141_39948 k141_39948_59 55659 56654 + 3.A.1.34.1
TC k141_39948 k141_39948_60 56651 57571 + 3.A.1.34.1
TC k141_39948 k141_39948_61 57564 58322 + 3.A.1.34.1
pfam k141_39948 k141_39948_62 58457 59332 + DUF915
TC k141_39948 k141_39948_63 59440 60876 - 2.A.1.3.30
Gene ID: k141_39948_55
Type: CAZyme
Location: 52315 - 53769 (-)
Gene ID: k141_39948_56
Type: TC
Location: 53782 - 54105 (-)
Gene ID: k141_39948_57
Type: TC
Location: 54179 - 54490 (-)
Gene ID: k141_39948_58
Type: TF
Location: 54646 - 55341 (+)
Gene ID: k141_39948_59
Type: TC
Location: 55659 - 56654 (+)
Gene ID: k141_39948_60
Type: TC
Location: 56651 - 57571 (+)
Gene ID: k141_39948_61
Type: TC
Location: 57564 - 58322 (+)
Gene ID: k141_39948_62
Type: pfam
Location: 58457 - 59332 (+)
Gene ID: k141_39948_63
Type: TC
Location: 59440 - 60876 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List