Cluster: CGMR061239_CGC30
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR061239
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_20802 | k141_20802_25 | 26762 | 28036 | + | 2.A.41.1.3 |
| TC | k141_20802 | k141_20802_26 | 28071 | 29336 | + | 2.A.40.7.2 |
| STP | k141_20802 | k141_20802_27 | 29349 | 30299 | + | HTH_IclR |
| STP | k141_20802 | k141_20802_28 | 30322 | 31620 | + | Glycos_trans_3N |
| TC | k141_20802 | k141_20802_29 | 31924 | 33174 | - | 2.A.1.5.2 |
| CAZyme | k141_20802 | k141_20802_30 | 33186 | 34166 | - | GH43_26 |
Gene ID: k141_20802_25
Type: TC
Location: 26762 - 28036 (+)
Type: TC
Location: 26762 - 28036 (+)
Gene ID: k141_20802_26
Type: TC
Location: 28071 - 29336 (+)
Type: TC
Location: 28071 - 29336 (+)
Gene ID: k141_20802_27
Type: STP
Location: 29349 - 30299 (+)
Type: STP
Location: 29349 - 30299 (+)
Gene ID: k141_20802_28
Type: STP
Location: 30322 - 31620 (+)
Type: STP
Location: 30322 - 31620 (+)
Gene ID: k141_20802_29
Type: TC
Location: 31924 - 33174 (-)
Type: TC
Location: 31924 - 33174 (-)
Gene ID: k141_20802_30
Type: CAZyme
Location: 33186 - 34166 (-)
Type: CAZyme
Location: 33186 - 34166 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Pediococcus
Species
Pediococcus acidilactici
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.