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Cluster: CGMR061239_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_54592 k141_54592_20 21289 22434 - CE9
STP k141_54592 k141_54592_21 22445 23620 - SIS | SIS
TF k141_54592 k141_54592_22 23644 24378 - GntR
TC k141_54592 k141_54592_23 24462 25292 - 4.A.6.1.18
TC k141_54592 k141_54592_24 25276 26193 - 4.A.6.1.18
TC k141_54592 k141_54592_25 26214 26708 - 4.A.6.1.18
NULL(UNKNOWN) k141_54592 k141_54592_26 26729 28756 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_54592 k141_54592_27 28762 29157 - 4.A.6.1.21
NULL(UNKNOWN) k141_54592 k141_54592_28 29672 29962 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_54592 k141_54592_29 30067 31575 - CE20
pfam k141_54592 k141_54592_30 31651 32529 - Aldose_epim
TC k141_54592 k141_54592_31 32782 33285 + 2.A.88.9.1
Gene ID: k141_54592_20
Type: CAZyme
Location: 21289 - 22434 (-)
Gene ID: k141_54592_21
Type: STP
Location: 22445 - 23620 (-)
Gene ID: k141_54592_22
Type: TF
Location: 23644 - 24378 (-)
Gene ID: k141_54592_23
Type: TC
Location: 24462 - 25292 (-)
Gene ID: k141_54592_24
Type: TC
Location: 25276 - 26193 (-)
Gene ID: k141_54592_25
Type: TC
Location: 26214 - 26708 (-)
Gene ID: k141_54592_26
Type:
Location: 26729 - 28756 (-)
Gene ID: k141_54592_27
Type: TC
Location: 28762 - 29157 (-)
Gene ID: k141_54592_28
Type:
Location: 29672 - 29962 (+)
Gene ID: k141_54592_29
Type: CAZyme
Location: 30067 - 31575 (-)
Gene ID: k141_54592_30
Type: pfam
Location: 31651 - 32529 (-)
Gene ID: k141_54592_31
Type: TC
Location: 32782 - 33285 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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