Cluster: CGMR061239_CGC21
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR061239
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_77111 | k141_77111_3 | 1384 | 2475 | - | GT28 |
| pfam | k141_77111 | k141_77111_4 | 2472 | 3866 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | k141_77111 | k141_77111_5 | 3879 | 4835 | - | 9.B.146.1.6 |
Gene ID: k141_77111_3
Type: CAZyme
Location: 1384 - 2475 (-)
Type: CAZyme
Location: 1384 - 2475 (-)
Gene ID: k141_77111_4
Type: pfam
Location: 2472 - 3866 (-)
Type: pfam
Location: 2472 - 3866 (-)
Gene ID: k141_77111_5
Type: TC
Location: 3879 - 4835 (-)
Type: TC
Location: 3879 - 4835 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Pediococcus
Species
Pediococcus acidilactici
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.