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Cluster: CGMR061239_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_18293 k141_18293_20 20949 21371 - 1.A.22.1.3
TC k141_18293 k141_18293_21 21824 22144 - 2.A.7.1.1
TF k141_18293 k141_18293_22 22389 23360 + LacI
pfam k141_18293 k141_18293_23 23571 23888 + PTS_IIB
TC k141_18293 k141_18293_24 23878 25137 + 4.A.3.2.3
CAZyme k141_18293 k141_18293_25 25141 26235 + GH170
pfam k141_18293 k141_18293_26 26256 26591 + PTS_IIA
CAZyme k141_18293 k141_18293_27 26805 28037 + GH29
TC k141_18293 k141_18293_28 28117 28494 - 9.B.124.1.7
Gene ID: k141_18293_20
Type: TC
Location: 20949 - 21371 (-)
Gene ID: k141_18293_21
Type: TC
Location: 21824 - 22144 (-)
Gene ID: k141_18293_22
Type: TF
Location: 22389 - 23360 (+)
Gene ID: k141_18293_23
Type: pfam
Location: 23571 - 23888 (+)
Gene ID: k141_18293_24
Type: TC
Location: 23878 - 25137 (+)
Gene ID: k141_18293_25
Type: CAZyme
Location: 25141 - 26235 (+)
Gene ID: k141_18293_26
Type: pfam
Location: 26256 - 26591 (+)
Gene ID: k141_18293_27
Type: CAZyme
Location: 26805 - 28037 (+)
Gene ID: k141_18293_28
Type: TC
Location: 28117 - 28494 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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