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Cluster: CGMR061239_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_17513 k141_17513_2 405 2612 + GH3
TC k141_17513 k141_17513_3 2636 3982 + 4.A.3.2.2
pfam k141_17513 k141_17513_4 4005 4889 + ROK
CAZyme k141_17513 k141_17513_5 4882 6249 + GH1
peptidase k141_17513 k141_17513_6 6317 7213 + S09.UPW
CAZyme k141_17513 k141_17513_7 7216 8925 + GH123
peptidase k141_17513 k141_17513_8 8961 9959 + S09.UPC
TF k141_17513 k141_17513_9 10181 12100 + Mga
TC k141_17513 k141_17513_10 12104 12556 + 4.A.2.1.23
TC k141_17513 k141_17513_11 12582 12767 + 4.A.2.1.10
Gene ID: k141_17513_2
Type: CAZyme
Location: 405 - 2612 (+)
Gene ID: k141_17513_3
Type: TC
Location: 2636 - 3982 (+)
Gene ID: k141_17513_4
Type: pfam
Location: 4005 - 4889 (+)
Gene ID: k141_17513_5
Type: CAZyme
Location: 4882 - 6249 (+)
Gene ID: k141_17513_6
Type: peptidase
Location: 6317 - 7213 (+)
Gene ID: k141_17513_7
Type: CAZyme
Location: 7216 - 8925 (+)
Gene ID: k141_17513_8
Type: peptidase
Location: 8961 - 9959 (+)
Gene ID: k141_17513_9
Type: TF
Location: 10181 - 12100 (+)
Gene ID: k141_17513_10
Type: TC
Location: 12104 - 12556 (+)
Gene ID: k141_17513_11
Type: TC
Location: 12582 - 12767 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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