Cluster: CGMR060366_CGC32
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR060366
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1413 | k141_1413_143 | 154818 | 157448 | + | 3.A.3.4.1 |
| pfam | k141_1413 | k141_1413_144 | 157607 | 158032 | + | Ribosomal_L11 | Ribosomal_L11_N |
| TC | k141_1413 | k141_1413_145 | 158129 | 158818 | + | 1.C.82.1.1 |
| pfam | k141_1413 | k141_1413_146 | 158919 | 159464 | + | Acetyltransf_1 | Acetyltransf_3 |
| sulfatase | k141_1413 | k141_1413_147 | 159631 | 161004 | + | S1_6 |
| CAZyme | k141_1413 | k141_1413_148 | 161554 | 163107 | + | GT4 |
| CAZyme | k141_1413 | k141_1413_149 | 163104 | 164600 | + | GT4 |
Gene ID: k141_1413_143
Type: TC
Location: 154818 - 157448 (+)
Type: TC
Location: 154818 - 157448 (+)
Gene ID: k141_1413_144
Type: pfam
Location: 157607 - 158032 (+)
Type: pfam
Location: 157607 - 158032 (+)
Gene ID: k141_1413_145
Type: TC
Location: 158129 - 158818 (+)
Type: TC
Location: 158129 - 158818 (+)
Gene ID: k141_1413_146
Type: pfam
Location: 158919 - 159464 (+)
Type: pfam
Location: 158919 - 159464 (+)
Gene ID: k141_1413_147
Type: sulfatase
Location: 159631 - 161004 (+)
Type: sulfatase
Location: 159631 - 161004 (+)
Gene ID: k141_1413_148
Type: CAZyme
Location: 161554 - 163107 (+)
Type: CAZyme
Location: 161554 - 163107 (+)
Gene ID: k141_1413_149
Type: CAZyme
Location: 163104 - 164600 (+)
Type: CAZyme
Location: 163104 - 164600 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lacticaseibacillus
Species
Lacticaseibacillus rhamnosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.