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Cluster: CGMR060366_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_743 k141_743_23 24214 25662 + 3.A.1.3.20
pfam k141_743 k141_743_24 25723 26943 + Arginosuc_synth | Arginosuc_syn_C
pfam k141_743 k141_743_25 26936 28339 + Lyase_1 | ASL_C2
CAZyme k141_743 k141_743_26 28470 29570 - GH170
pfam k141_743 k141_743_27 29588 30007 - DUF3284
TC k141_743 k141_743_28 30047 31408 - 4.A.3.2.4
TF k141_743 k141_743_29 31499 32209 - GntR
TC k141_743 k141_743_30 32424 32753 + 4.A.3.2.4
TC k141_743 k141_743_31 32753 33082 + 4.A.3.2.4
Gene ID: k141_743_23
Type: TC
Location: 24214 - 25662 (+)
Gene ID: k141_743_24
Type: pfam
Location: 25723 - 26943 (+)
Gene ID: k141_743_25
Type: pfam
Location: 26936 - 28339 (+)
Gene ID: k141_743_26
Type: CAZyme
Location: 28470 - 29570 (-)
Gene ID: k141_743_27
Type: pfam
Location: 29588 - 30007 (-)
Gene ID: k141_743_28
Type: TC
Location: 30047 - 31408 (-)
Gene ID: k141_743_29
Type: TF
Location: 31499 - 32209 (-)
Gene ID: k141_743_30
Type: TC
Location: 32424 - 32753 (+)
Gene ID: k141_743_31
Type: TC
Location: 32753 - 33082 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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