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Cluster: CGMR060366_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_20145 k141_20145_22 13888 14574 + 3.A.1.3.13
TC k141_20145 k141_20145_23 14571 15239 + 3.A.1.3.25
TC k141_20145 k141_20145_24 15253 16131 + 3.A.1.3.13
TC k141_20145 k141_20145_25 16141 16893 + 3.A.1.3.13
pfam k141_20145 k141_20145_26 16890 17951 + NAD_Gly3P_dh_N | Octopine_DH | ApbA | F420_oxidored
peptidase k141_20145 k141_20145_27 18037 19467 - M20.UND
TC k141_20145 k141_20145_28 19491 20690 - 2.A.1.14.14
CAZyme k141_20145 k141_20145_29 20924 23140 - GH39
TF k141_20145 k141_20145_30 23301 24155 - HTH_AraC | HTH_AraC
TC k141_20145 k141_20145_31 24423 25880 - 2.A.3.1.18
TC k141_20145 k141_20145_32 26028 27509 - 2.A.3.7.4
CAZyme k141_20145 k141_20145_33 27542 30520 - GH2
Gene ID: k141_20145_22
Type: TC
Location: 13888 - 14574 (+)
Gene ID: k141_20145_23
Type: TC
Location: 14571 - 15239 (+)
Gene ID: k141_20145_24
Type: TC
Location: 15253 - 16131 (+)
Gene ID: k141_20145_25
Type: TC
Location: 16141 - 16893 (+)
Gene ID: k141_20145_26
Type: pfam
Location: 16890 - 17951 (+)
Gene ID: k141_20145_27
Type: peptidase
Location: 18037 - 19467 (-)
Gene ID: k141_20145_28
Type: TC
Location: 19491 - 20690 (-)
Gene ID: k141_20145_29
Type: CAZyme
Location: 20924 - 23140 (-)
Gene ID: k141_20145_30
Type: TF
Location: 23301 - 24155 (-)
Gene ID: k141_20145_31
Type: TC
Location: 24423 - 25880 (-)
Gene ID: k141_20145_32
Type: TC
Location: 26028 - 27509 (-)
Gene ID: k141_20145_33
Type: CAZyme
Location: 27542 - 30520 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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