Cluster: CGMR060366_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR060366
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_20498 | k141_20498_35 | 37427 | 38722 | - | 2.A.1.2.93 |
| TF | k141_20498 | k141_20498_36 | 39126 | 39827 | + | GntR |
| STP | k141_20498 | k141_20498_37 | 39772 | 40908 | + | PfkB |
| CAZyme | k141_20498 | k141_20498_38 | 40940 | 43459 | + | GH59 |
| NULL(UNKNOWN) | k141_20498 | k141_20498_39 | 43793 | 44125 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_20498 | k141_20498_40 | 44253 | 44669 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_20498 | k141_20498_41 | 44888 | 46258 | - | 2.A.1.3.61 |
Gene ID: k141_20498_35
Type: TC
Location: 37427 - 38722 (-)
Type: TC
Location: 37427 - 38722 (-)
Gene ID: k141_20498_36
Type: TF
Location: 39126 - 39827 (+)
Type: TF
Location: 39126 - 39827 (+)
Gene ID: k141_20498_37
Type: STP
Location: 39772 - 40908 (+)
Type: STP
Location: 39772 - 40908 (+)
Gene ID: k141_20498_38
Type: CAZyme
Location: 40940 - 43459 (+)
Type: CAZyme
Location: 40940 - 43459 (+)
Gene ID: k141_20498_39
Type:
Location: 43793 - 44125 (+)
Type:
Location: 43793 - 44125 (+)
Gene ID: k141_20498_40
Type:
Location: 44253 - 44669 (+)
Type:
Location: 44253 - 44669 (+)
Gene ID: k141_20498_41
Type: TC
Location: 44888 - 46258 (-)
Type: TC
Location: 44888 - 46258 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lacticaseibacillus
Species
Lacticaseibacillus rhamnosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.