Cluster: CGMR060366_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR060366
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_2024 | k141_2024_22 | 31911 | 33377 | - | 2.A.17.1.6 |
| TC | k141_2024 | k141_2024_23 | 33666 | 35984 | - | 3.A.1.122.13 |
| NULL(UNKNOWN) | k141_2024 | k141_2024_24 | 36191 | 36565 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_2024 | k141_2024_25 | 36615 | 37037 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_2024 | k141_2024_26 | 37614 | 39047 | + | 2.A.2.1.2 |
| CAZyme | k141_2024 | k141_2024_27 | 39226 | 40362 | + | GH29 |
Gene ID: k141_2024_22
Type: TC
Location: 31911 - 33377 (-)
Type: TC
Location: 31911 - 33377 (-)
Gene ID: k141_2024_23
Type: TC
Location: 33666 - 35984 (-)
Type: TC
Location: 33666 - 35984 (-)
Gene ID: k141_2024_24
Type:
Location: 36191 - 36565 (-)
Type:
Location: 36191 - 36565 (-)
Gene ID: k141_2024_25
Type:
Location: 36615 - 37037 (-)
Type:
Location: 36615 - 37037 (-)
Gene ID: k141_2024_26
Type: TC
Location: 37614 - 39047 (+)
Type: TC
Location: 37614 - 39047 (+)
Gene ID: k141_2024_27
Type: CAZyme
Location: 39226 - 40362 (+)
Type: CAZyme
Location: 39226 - 40362 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lacticaseibacillus
Species
Lacticaseibacillus rhamnosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.