Cluster: CGMR059208_CGC23
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR059208
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_35583 | k141_35583_68 | 77918 | 78850 | + | 1.A.23.4.6 |
| pfam | k141_35583 | k141_35583_69 | 78905 | 79327 | + | DUF5606 | DUF6852 |
| pfam | k141_35583 | k141_35583_70 | 79385 | 79933 | - | GrpB |
| CAZyme | k141_35583 | k141_35583_71 | 80018 | 81034 | - | GH43_3 |
Gene ID: k141_35583_68
Type: TC
Location: 77918 - 78850 (+)
Type: TC
Location: 77918 - 78850 (+)
Gene ID: k141_35583_69
Type: pfam
Location: 78905 - 79327 (+)
Type: pfam
Location: 78905 - 79327 (+)
Gene ID: k141_35583_70
Type: pfam
Location: 79385 - 79933 (-)
Type: pfam
Location: 79385 - 79933 (-)
Gene ID: k141_35583_71
Type: CAZyme
Location: 80018 - 81034 (-)
Type: CAZyme
Location: 80018 - 81034 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp910587675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_35583_69 | vegetarian > vegan | 1.50112 | 0.00701 |