Cluster: CGMR057071_CGC26
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR057071
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_100215 | k141_100215_36 | 46426 | 47196 | + | 2.A.79.1.5 |
| pfam | k141_100215 | k141_100215_37 | 47190 | 47612 | + | ThrE | ThrE_2 |
| CAZyme | k141_100215 | k141_100215_38 | 47878 | 49140 | + | GT2 |
Gene ID: k141_100215_36
Type: TC
Location: 46426 - 47196 (+)
Type: TC
Location: 46426 - 47196 (+)
Gene ID: k141_100215_37
Type: pfam
Location: 47190 - 47612 (+)
Type: pfam
Location: 47190 - 47612 (+)
Gene ID: k141_100215_38
Type: CAZyme
Location: 47878 - 49140 (+)
Type: CAZyme
Location: 47878 - 49140 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania filiformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_100215_37 | vegetarian > vegan | 1.28305 | 0.04411 |