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Cluster: CGMR057071_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_66965 k141_66965_56 58481 58897 + 4.A.6.1.19
TC k141_66965 k141_66965_57 58954 59454 + 4.A.6.1.19
TC k141_66965 k141_66965_58 59467 60267 + 4.A.6.1.22
TC k141_66965 k141_66965_59 60260 61075 + 4.A.6.1.19
CAZyme k141_66965 k141_66965_60 61088 62284 + CE9
pfam k141_66965 k141_66965_61 62792 65524 + Sigma54_activat | PRD | EIIA-man
TC k141_66965 k141_66965_62 65543 65956 + 4.A.6.1.19
TC k141_66965 k141_66965_63 66035 66535 + 4.A.6.1.16
TC k141_66965 k141_66965_64 66548 67345 + 4.A.6.1.19
TC k141_66965 k141_66965_65 67338 68150 + 4.A.6.1.19
CAZyme k141_66965 k141_66965_66 68218 69435 + CE9
CAZyme k141_66965 k141_66965_67 69457 70659 + CE9
pfam k141_66965 k141_66965_68 70828 71289 - DUF3021
TF k141_66965 k141_66965_69 71299 71739 - LytTR
TC k141_66965 k141_66965_70 72009 73394 + 2.A.22.5.3
Gene ID: k141_66965_56
Type: TC
Location: 58481 - 58897 (+)
Gene ID: k141_66965_57
Type: TC
Location: 58954 - 59454 (+)
Gene ID: k141_66965_58
Type: TC
Location: 59467 - 60267 (+)
Gene ID: k141_66965_59
Type: TC
Location: 60260 - 61075 (+)
Gene ID: k141_66965_60
Type: CAZyme
Location: 61088 - 62284 (+)
Gene ID: k141_66965_61
Type: pfam
Location: 62792 - 65524 (+)
Gene ID: k141_66965_62
Type: TC
Location: 65543 - 65956 (+)
Gene ID: k141_66965_63
Type: TC
Location: 66035 - 66535 (+)
Gene ID: k141_66965_64
Type: TC
Location: 66548 - 67345 (+)
Gene ID: k141_66965_65
Type: TC
Location: 67338 - 68150 (+)
Gene ID: k141_66965_66
Type: CAZyme
Location: 68218 - 69435 (+)
Gene ID: k141_66965_67
Type: CAZyme
Location: 69457 - 70659 (+)
Gene ID: k141_66965_68
Type: pfam
Location: 70828 - 71289 (-)
Gene ID: k141_66965_69
Type: TF
Location: 71299 - 71739 (-)
Gene ID: k141_66965_70
Type: TC
Location: 72009 - 73394 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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