Cluster: CGMR057071_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR057071
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_125203 | k141_125203_32 | 32847 | 33752 | + | 3.A.1.1.11 |
| TC | k141_125203 | k141_125203_33 | 33763 | 34584 | + | 3.A.1.1.34 |
| NULL(UNKNOWN) | k141_125203 | k141_125203_34 | 34584 | 35051 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_125203 | k141_125203_35 | 35039 | 35749 | + | CE14 |
| pfam | k141_125203 | k141_125203_36 | 35752 | 36804 | + | Amidohydro_2 |
| CAZyme | k141_125203 | k141_125203_37 | 36820 | 38202 | + | GH4 |
Gene ID: k141_125203_32
Type: TC
Location: 32847 - 33752 (+)
Type: TC
Location: 32847 - 33752 (+)
Gene ID: k141_125203_33
Type: TC
Location: 33763 - 34584 (+)
Type: TC
Location: 33763 - 34584 (+)
Gene ID: k141_125203_34
Type:
Location: 34584 - 35051 (+)
Type:
Location: 34584 - 35051 (+)
Gene ID: k141_125203_35
Type: CAZyme
Location: 35039 - 35749 (+)
Type: CAZyme
Location: 35039 - 35749 (+)
Gene ID: k141_125203_36
Type: pfam
Location: 35752 - 36804 (+)
Type: pfam
Location: 35752 - 36804 (+)
Gene ID: k141_125203_37
Type: CAZyme
Location: 36820 - 38202 (+)
Type: CAZyme
Location: 36820 - 38202 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania filiformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.