Cluster: CGMR054096_CGC6
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR054096
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_86745 | k141_86745_49 | 60004 | 62685 | - | 1.B.14.12.3 |
| TF | k141_86745 | k141_86745_50 | 62846 | 66877 | - | HTH_AraC |
| TC | k141_86745 | k141_86745_51 | 67054 | 70200 | + | 1.B.14.6.1 |
| pfam | k141_86745 | k141_86745_52 | 70214 | 71872 | + | SusD_RagB | SusD-like_3 |
| pfam | k141_86745 | k141_86745_53 | 71907 | 73064 | + | SusE |
| CAZyme | k141_86745 | k141_86745_54 | 73076 | 74332 | + | GH76 |
| pfam | k141_86745 | k141_86745_55 | 74346 | 75527 | + | SusE |
| CAZyme | k141_86745 | k141_86745_56 | 75536 | 76954 | + | GH125 |
| pfam | k141_86745 | k141_86745_57 | 77014 | 79404 | + | SusE | SusE |
| CAZyme | k141_86745 | k141_86745_58 | 79409 | 81142 | + | GH43_3 |
| CAZyme | k141_86745 | k141_86745_59 | 81293 | 83296 | + | GH97 |
| sulfatase | k141_86745 | k141_86745_60 | 83311 | 84990 | + | S1_4 |
| sulfatase | k141_86745 | k141_86745_61 | 84996 | 87518 | + | S1_4 |
| CAZyme | k141_86745 | k141_86745_62 | 87596 | 89443 | - | GH2 |
| pfam | k141_86745 | k141_86745_63 | 89698 | 90267 | + | Acetyltransf_1 | Acetyltransf_7 |
| TC | k141_86745 | k141_86745_64 | 90389 | 91474 | - | 2.A.98.1.3 |
Gene ID: k141_86745_49
Type: TC
Location: 60004 - 62685 (-)
Type: TC
Location: 60004 - 62685 (-)
Gene ID: k141_86745_50
Type: TF
Location: 62846 - 66877 (-)
Type: TF
Location: 62846 - 66877 (-)
Gene ID: k141_86745_51
Type: TC
Location: 67054 - 70200 (+)
Type: TC
Location: 67054 - 70200 (+)
Gene ID: k141_86745_52
Type: pfam
Location: 70214 - 71872 (+)
Type: pfam
Location: 70214 - 71872 (+)
Gene ID: k141_86745_53
Type: pfam
Location: 71907 - 73064 (+)
Type: pfam
Location: 71907 - 73064 (+)
Gene ID: k141_86745_54
Type: CAZyme
Location: 73076 - 74332 (+)
Type: CAZyme
Location: 73076 - 74332 (+)
Gene ID: k141_86745_55
Type: pfam
Location: 74346 - 75527 (+)
Type: pfam
Location: 74346 - 75527 (+)
Gene ID: k141_86745_56
Type: CAZyme
Location: 75536 - 76954 (+)
Type: CAZyme
Location: 75536 - 76954 (+)
Gene ID: k141_86745_57
Type: pfam
Location: 77014 - 79404 (+)
Type: pfam
Location: 77014 - 79404 (+)
Gene ID: k141_86745_58
Type: CAZyme
Location: 79409 - 81142 (+)
Type: CAZyme
Location: 79409 - 81142 (+)
Gene ID: k141_86745_59
Type: CAZyme
Location: 81293 - 83296 (+)
Type: CAZyme
Location: 81293 - 83296 (+)
Gene ID: k141_86745_60
Type: sulfatase
Location: 83311 - 84990 (+)
Type: sulfatase
Location: 83311 - 84990 (+)
Gene ID: k141_86745_61
Type: sulfatase
Location: 84996 - 87518 (+)
Type: sulfatase
Location: 84996 - 87518 (+)
Gene ID: k141_86745_62
Type: CAZyme
Location: 87596 - 89443 (-)
Type: CAZyme
Location: 87596 - 89443 (-)
Gene ID: k141_86745_63
Type: pfam
Location: 89698 - 90267 (+)
Type: pfam
Location: 89698 - 90267 (+)
Gene ID: k141_86745_64
Type: TC
Location: 90389 - 91474 (-)
Type: TC
Location: 90389 - 91474 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp944321195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.