Cluster: CGMR051204_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR051204
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_102178 | k141_102178_85 | 83312 | 84232 | - | GT2 |
| NULL(UNKNOWN) | k141_102178 | k141_102178_86 | 84225 | 85550 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_102178 | k141_102178_87 | 85534 | 86664 | - | LytR_cpsA_psr |
| TC | k141_102178 | k141_102178_88 | 86683 | 88086 | - | 9.B.18.1.1 |
| pfam | k141_102178 | k141_102178_89 | 88244 | 89266 | - | Acyl_transf_3 |
| CAZyme | k141_102178 | k141_102178_90 | 89380 | 90360 | + | GT2 |
Gene ID: k141_102178_85
Type: CAZyme
Location: 83312 - 84232 (-)
Type: CAZyme
Location: 83312 - 84232 (-)
Gene ID: k141_102178_86
Type:
Location: 84225 - 85550 (-)
Type:
Location: 84225 - 85550 (-)
Gene ID: k141_102178_87
Type: pfam
Location: 85534 - 86664 (-)
Type: pfam
Location: 85534 - 86664 (-)
Gene ID: k141_102178_88
Type: TC
Location: 86683 - 88086 (-)
Type: TC
Location: 86683 - 88086 (-)
Gene ID: k141_102178_89
Type: pfam
Location: 88244 - 89266 (-)
Type: pfam
Location: 88244 - 89266 (-)
Gene ID: k141_102178_90
Type: CAZyme
Location: 89380 - 90360 (+)
Type: CAZyme
Location: 89380 - 90360 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Clostridium_AP
Species
Clostridium_AP scindens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.