Cluster: CGMR051204_CGC17
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR051204
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_55968 | k141_55968_4 | 3643 | 4887 | + | 2.A.23.4.1 |
| pfam | k141_55968 | k141_55968_5 | 4967 | 5677 | - | Pentapeptide | Pentapeptide | Pentapeptide | DUF5758 |
| CAZyme | k141_55968 | k141_55968_6 | 5716 | 7236 | - | GH77 |
Gene ID: k141_55968_4
Type: TC
Location: 3643 - 4887 (+)
Type: TC
Location: 3643 - 4887 (+)
Gene ID: k141_55968_5
Type: pfam
Location: 4967 - 5677 (-)
Type: pfam
Location: 4967 - 5677 (-)
Gene ID: k141_55968_6
Type: CAZyme
Location: 5716 - 7236 (-)
Type: CAZyme
Location: 5716 - 7236 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Clostridium_AP
Species
Clostridium_AP scindens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.