Cluster: CGMR051204_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR051204
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_148593 | k141_148593_20 | 19299 | 20480 | - | 9.B.174.1.1 |
| STP | k141_148593 | k141_148593_21 | 20498 | 21589 | - | Peptidase_M23 |
| pfam | k141_148593 | k141_148593_22 | 21626 | 22507 | - | FtsX | FtsX_ECD |
| TC | k141_148593 | k141_148593_23 | 22524 | 23210 | - | 3.A.1.140.1 |
| pfam | k141_148593 | k141_148593_24 | 23227 | 24315 | - | HTH_30 | GGDEF_2 |
| CAZyme | k141_148593 | k141_148593_25 | 24534 | 25232 | - | GT26 |
Gene ID: k141_148593_20
Type: TC
Location: 19299 - 20480 (-)
Type: TC
Location: 19299 - 20480 (-)
Gene ID: k141_148593_21
Type: STP
Location: 20498 - 21589 (-)
Type: STP
Location: 20498 - 21589 (-)
Gene ID: k141_148593_22
Type: pfam
Location: 21626 - 22507 (-)
Type: pfam
Location: 21626 - 22507 (-)
Gene ID: k141_148593_23
Type: TC
Location: 22524 - 23210 (-)
Type: TC
Location: 22524 - 23210 (-)
Gene ID: k141_148593_24
Type: pfam
Location: 23227 - 24315 (-)
Type: pfam
Location: 23227 - 24315 (-)
Gene ID: k141_148593_25
Type: CAZyme
Location: 24534 - 25232 (-)
Type: CAZyme
Location: 24534 - 25232 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Clostridium_AP
Species
Clostridium_AP scindens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.