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Cluster: CGMR050004_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_36792 k141_36792_24 23532 25355 - GH53
peptidase k141_36792 k141_36792_25 25512 26780 - M20.UPB
TC k141_36792 k141_36792_26 26793 28529 - 3.A.1.5.25
CAZyme k141_36792 k141_36792_27 29415 30830 - GH1
TC k141_36792 k141_36792_28 30871 32757 - 4.A.1.2.11
pfam k141_36792 k141_36792_29 32842 33198 - PRD
pfam k141_36792 k141_36792_30 33173 33682 - PRD | CAT_RBD
TC k141_36792 k141_36792_31 34096 36099 + 4.A.1.1.2
CAZyme k141_36792 k141_36792_32 36201 37355 - GT4
TC k141_36792 k141_36792_33 37395 38747 - 2.A.1.1.26
Gene ID: k141_36792_24
Type: CAZyme
Location: 23532 - 25355 (-)
Gene ID: k141_36792_25
Type: peptidase
Location: 25512 - 26780 (-)
Gene ID: k141_36792_26
Type: TC
Location: 26793 - 28529 (-)
Gene ID: k141_36792_27
Type: CAZyme
Location: 29415 - 30830 (-)
Gene ID: k141_36792_28
Type: TC
Location: 30871 - 32757 (-)
Gene ID: k141_36792_29
Type: pfam
Location: 32842 - 33198 (-)
Gene ID: k141_36792_30
Type: pfam
Location: 33173 - 33682 (-)
Gene ID: k141_36792_31
Type: TC
Location: 34096 - 36099 (+)
Gene ID: k141_36792_32
Type: CAZyme
Location: 36201 - 37355 (-)
Gene ID: k141_36792_33
Type: TC
Location: 37395 - 38747 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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