Cluster: CGMR050004_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR050004
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_108370 | k141_108370_20 | 21539 | 22180 | - | GH73 |
| pfam | k141_108370 | k141_108370_21 | 22200 | 22805 | - | ECF_trnsprt |
| pfam | k141_108370 | k141_108370_22 | 22920 | 23873 | + | 2-Hacid_dh | 2-Hacid_dh_C | NAD_binding_2 |
| TC | k141_108370 | k141_108370_23 | 24091 | 25530 | - | 2.A.3.3.22 |
Gene ID: k141_108370_20
Type: CAZyme
Location: 21539 - 22180 (-)
Type: CAZyme
Location: 21539 - 22180 (-)
Gene ID: k141_108370_21
Type: pfam
Location: 22200 - 22805 (-)
Type: pfam
Location: 22200 - 22805 (-)
Gene ID: k141_108370_22
Type: pfam
Location: 22920 - 23873 (+)
Type: pfam
Location: 22920 - 23873 (+)
Gene ID: k141_108370_23
Type: TC
Location: 24091 - 25530 (-)
Type: TC
Location: 24091 - 25530 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Pediococcus
Species
Pediococcus parvulus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.