Cluster: CGMR049670_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR049670
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_137001 | k141_137001_261 | 306770 | 307882 | - | GT28 |
| TC | k141_137001 | k141_137001_262 | 307938 | 309203 | - | 2.A.103.1.3 |
| pfam | k141_137001 | k141_137001_263 | 309258 | 310604 | - | Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N |
| TC | k141_137001 | k141_137001_264 | 310607 | 311854 | - | 9.B.146.1.6 |
| pfam | k141_137001 | k141_137001_265 | 311897 | 313363 | - | Mur_ligase | Mur_ligase_C | Mur_ligase_M |
| TC | k141_137001 | k141_137001_266 | 313486 | 315756 | - | 2.A.37.1.5 |
Gene ID: k141_137001_261
Type: CAZyme
Location: 306770 - 307882 (-)
Type: CAZyme
Location: 306770 - 307882 (-)
Gene ID: k141_137001_262
Type: TC
Location: 307938 - 309203 (-)
Type: TC
Location: 307938 - 309203 (-)
Gene ID: k141_137001_263
Type: pfam
Location: 309258 - 310604 (-)
Type: pfam
Location: 309258 - 310604 (-)
Gene ID: k141_137001_264
Type: TC
Location: 310607 - 311854 (-)
Type: TC
Location: 310607 - 311854 (-)
Gene ID: k141_137001_265
Type: pfam
Location: 311897 - 313363 (-)
Type: pfam
Location: 311897 - 313363 (-)
Gene ID: k141_137001_266
Type: TC
Location: 313486 - 315756 (-)
Type: TC
Location: 313486 - 315756 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp900549685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_137001_262 | vegetarian > omnivore | 1.33302 | 0.01386 |
| k141_137001_266 | vegetarian > omnivore | 1.77106 | 0.01386 |