Cluster: CGMR049670_CGC29
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR049670
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_219577 | k141_219577_9 | 10927 | 13716 | - | GH2 |
| pfam | k141_219577 | k141_219577_10 | 14174 | 17002 | - | UvrA_DNA-bind | UvrA_inter |
| CAZyme | k141_219577 | k141_219577_11 | 17032 | 17961 | - | GH23 |
| pfam | k141_219577 | k141_219577_12 | 18681 | 20006 | + | OEP | OEP |
| TC | k141_219577 | k141_219577_13 | 20017 | 21048 | + | 8.A.1.1.2 |
| NULL(UNKNOWN) | k141_219577 | k141_219577_14 | 21053 | 22645 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_219577 | k141_219577_15 | 23058 | 25139 | + | 2.A.36.7.3 |
Gene ID: k141_219577_9
Type: CAZyme
Location: 10927 - 13716 (-)
Type: CAZyme
Location: 10927 - 13716 (-)
Gene ID: k141_219577_10
Type: pfam
Location: 14174 - 17002 (-)
Type: pfam
Location: 14174 - 17002 (-)
Gene ID: k141_219577_11
Type: CAZyme
Location: 17032 - 17961 (-)
Type: CAZyme
Location: 17032 - 17961 (-)
Gene ID: k141_219577_12
Type: pfam
Location: 18681 - 20006 (+)
Type: pfam
Location: 18681 - 20006 (+)
Gene ID: k141_219577_13
Type: TC
Location: 20017 - 21048 (+)
Type: TC
Location: 20017 - 21048 (+)
Gene ID: k141_219577_14
Type:
Location: 21053 - 22645 (+)
Type:
Location: 21053 - 22645 (+)
Gene ID: k141_219577_15
Type: TC
Location: 23058 - 25139 (+)
Type: TC
Location: 23058 - 25139 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp900549685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.