Cluster: CGMR049318_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR049318
- CGC Family ID: CGCFAM_08640
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_175680 | k141_175680_5 | 8166 | 8534 | + | 1.E.40.3.1 |
| pfam | k141_175680 | k141_175680_6 | 8547 | 9905 | + | AA_permease | AA_permease_2 |
| CAZyme | k141_175680 | k141_175680_7 | 10160 | 11647 | - | GH1 |
| TC | k141_175680 | k141_175680_8 | 11671 | 13608 | - | 4.A.1.2.11 |
Gene ID: k141_175680_5
Type: TC
Location: 8166 - 8534 (+)
Type: TC
Location: 8166 - 8534 (+)
Gene ID: k141_175680_6
Type: pfam
Location: 8547 - 9905 (+)
Type: pfam
Location: 8547 - 9905 (+)
Gene ID: k141_175680_7
Type: CAZyme
Location: 10160 - 11647 (-)
Type: CAZyme
Location: 10160 - 11647 (-)
Gene ID: k141_175680_8
Type: TC
Location: 11671 - 13608 (-)
Type: TC
Location: 11671 - 13608 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella tanakaei
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.