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Cluster: CGMR049318_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_121145 k141_121145_1 603 1226 - 3.A.1.5.35
TC k141_121145 k141_121145_2 1233 2171 - 3.A.1.5.23
pfam k141_121145 k141_121145_3 2168 3055 - BPD_transp_1
TC k141_121145 k141_121145_4 3039 4016 - 3.A.1.5.20
TC k141_121145 k141_121145_5 4152 5639 - 3.A.1.5.38
STP k141_121145 k141_121145_6 5977 7437 - HD
STP k141_121145 k141_121145_7 7666 8595 - PfkB
TC k141_121145 k141_121145_8 8680 10389 - 8.A.7.1.1
STP k141_121145 k141_121145_9 10505 10768 - PTS-HPr
CAZyme k141_121145 k141_121145_10 11201 12151 + GT81
pfam k141_121145 k141_121145_11 12216 14321 - Sulfatase
CAZyme k141_121145 k141_121145_12 14532 15500 + GT2
Gene ID: k141_121145_1
Type: TC
Location: 603 - 1226 (-)
Gene ID: k141_121145_2
Type: TC
Location: 1233 - 2171 (-)
Gene ID: k141_121145_3
Type: pfam
Location: 2168 - 3055 (-)
Gene ID: k141_121145_4
Type: TC
Location: 3039 - 4016 (-)
Gene ID: k141_121145_5
Type: TC
Location: 4152 - 5639 (-)
Gene ID: k141_121145_6
Type: STP
Location: 5977 - 7437 (-)
Gene ID: k141_121145_7
Type: STP
Location: 7666 - 8595 (-)
Gene ID: k141_121145_8
Type: TC
Location: 8680 - 10389 (-)
Gene ID: k141_121145_9
Type: STP
Location: 10505 - 10768 (-)
Gene ID: k141_121145_10
Type: CAZyme
Location: 11201 - 12151 (+)
Gene ID: k141_121145_11
Type: pfam
Location: 12216 - 14321 (-)
Gene ID: k141_121145_12
Type: CAZyme
Location: 14532 - 15500 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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