Cluster: CGMR045438_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR045438
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_1115226 | k141_1115226_1 | 55 | 1137 | - | GH53 |
| pfam | k141_1115226 | k141_1115226_2 | 1274 | 2230 | - | CBM_48 |
| TC | k141_1115226 | k141_1115226_3 | 2353 | 4095 | - | 8.A.46.1.1 |
| TC | k141_1115226 | k141_1115226_4 | 4132 | 7122 | - | 1.B.14.6.1 |
| TC | k141_1115226 | k141_1115226_5 | 7245 | 8591 | - | 2.A.2.6.2 |
| NULL(UNKNOWN) | k141_1115226 | k141_1115226_6 | 9052 | 10083 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_1115226 | k141_1115226_7 | 10122 | 12305 | + | 2.A.16.2.2 |
Gene ID: k141_1115226_1
Type: CAZyme
Location: 55 - 1137 (-)
Type: CAZyme
Location: 55 - 1137 (-)
Gene ID: k141_1115226_2
Type: pfam
Location: 1274 - 2230 (-)
Type: pfam
Location: 1274 - 2230 (-)
Gene ID: k141_1115226_3
Type: TC
Location: 2353 - 4095 (-)
Type: TC
Location: 2353 - 4095 (-)
Gene ID: k141_1115226_4
Type: TC
Location: 4132 - 7122 (-)
Type: TC
Location: 4132 - 7122 (-)
Gene ID: k141_1115226_5
Type: TC
Location: 7245 - 8591 (-)
Type: TC
Location: 7245 - 8591 (-)
Gene ID: k141_1115226_6
Type:
Location: 9052 - 10083 (+)
Type:
Location: 9052 - 10083 (+)
Gene ID: k141_1115226_7
Type: TC
Location: 10122 - 12305 (+)
Type: TC
Location: 10122 - 12305 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Paludibacteraceae
Genus
RF16
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.