Cluster: CGMR045438_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR045438
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1169504 | k141_1169504_3 | 896 | 2101 | - | 3.D.5.1.1 |
| pfam | k141_1169504 | k141_1169504_4 | 2101 | 3453 | - | NQRA_N | NQRA_SLBB | NQRA_2nd |
| NULL(UNKNOWN) | k141_1169504 | k141_1169504_5 | 3683 | 5005 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_1169504 | k141_1169504_6 | 5025 | 7175 | + | 8.A.51.1.1 |
| TC | k141_1169504 | k141_1169504_7 | 7234 | 8487 | + | 2.A.1.7.11 |
| pfam | k141_1169504 | k141_1169504_8 | 8551 | 9510 | + | ROK |
| CAZyme | k141_1169504 | k141_1169504_9 | 9614 | 10174 | + | CE4 |
Gene ID: k141_1169504_3
Type: TC
Location: 896 - 2101 (-)
Type: TC
Location: 896 - 2101 (-)
Gene ID: k141_1169504_4
Type: pfam
Location: 2101 - 3453 (-)
Type: pfam
Location: 2101 - 3453 (-)
Gene ID: k141_1169504_5
Type:
Location: 3683 - 5005 (+)
Type:
Location: 3683 - 5005 (+)
Gene ID: k141_1169504_6
Type: TC
Location: 5025 - 7175 (+)
Type: TC
Location: 5025 - 7175 (+)
Gene ID: k141_1169504_7
Type: TC
Location: 7234 - 8487 (+)
Type: TC
Location: 7234 - 8487 (+)
Gene ID: k141_1169504_8
Type: pfam
Location: 8551 - 9510 (+)
Type: pfam
Location: 8551 - 9510 (+)
Gene ID: k141_1169504_9
Type: CAZyme
Location: 9614 - 10174 (+)
Type: CAZyme
Location: 9614 - 10174 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Paludibacteraceae
Genus
RF16
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.