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Cluster: CGMR045200_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_3209 k141_3209_25 25192 25578 - 2.A.7.22.1
TC k141_3209 k141_3209_26 25578 25913 - 2.A.7.22.2
CAZyme k141_3209 k141_3209_27 25910 27568 - GT83
pfam k141_3209 k141_3209_28 27565 28467 - Polysacc_deac_1
pfam k141_3209 k141_3209_29 28464 30446 - Formyl_trans_N | 3Beta_HSD | Epimerase | Formyl_trans_C | GDP_Man_Dehyd
CAZyme k141_3209 k141_3209_30 30443 31426 - GT2
STP k141_3209 k141_3209_31 31429 32568 - Aminotran_1_2
STP k141_3209 k141_3209_32 32853 33278 - NUDIX
TC k141_3209 k141_3209_33 33596 34138 + 1.B.68.1.1
Gene ID: k141_3209_25
Type: TC
Location: 25192 - 25578 (-)
Gene ID: k141_3209_26
Type: TC
Location: 25578 - 25913 (-)
Gene ID: k141_3209_27
Type: CAZyme
Location: 25910 - 27568 (-)
Gene ID: k141_3209_28
Type: pfam
Location: 27565 - 28467 (-)
Gene ID: k141_3209_29
Type: pfam
Location: 28464 - 30446 (-)
Gene ID: k141_3209_30
Type: CAZyme
Location: 30443 - 31426 (-)
Gene ID: k141_3209_31
Type: STP
Location: 31429 - 32568 (-)
Gene ID: k141_3209_32
Type: STP
Location: 32853 - 33278 (-)
Gene ID: k141_3209_33
Type: TC
Location: 33596 - 34138 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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