Cluster: CGMR045200_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR045200
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1912 | k141_1912_45 | 45771 | 46094 | + | 9.B.32.1.2 |
| TC | k141_1912 | k141_1912_46 | 46100 | 47236 | + | 8.A.1.1.4 |
| TF | k141_1912 | k141_1912_47 | 47244 | 48206 | - | HTH_1 |
| TC | k141_1912 | k141_1912_48 | 48328 | 49068 | + | 9.B.99.1.1 |
| CAZyme | k141_1912 | k141_1912_49 | 49156 | 51111 | - | GH127 |
| TC | k141_1912 | k141_1912_50 | 51122 | 52522 | - | 2.A.2.3.4 |
Gene ID: k141_1912_45
Type: TC
Location: 45771 - 46094 (+)
Type: TC
Location: 45771 - 46094 (+)
Gene ID: k141_1912_46
Type: TC
Location: 46100 - 47236 (+)
Type: TC
Location: 46100 - 47236 (+)
Gene ID: k141_1912_47
Type: TF
Location: 47244 - 48206 (-)
Type: TF
Location: 47244 - 48206 (-)
Gene ID: k141_1912_48
Type: TC
Location: 48328 - 49068 (+)
Type: TC
Location: 48328 - 49068 (+)
Gene ID: k141_1912_49
Type: CAZyme
Location: 49156 - 51111 (-)
Type: CAZyme
Location: 49156 - 51111 (-)
Gene ID: k141_1912_50
Type: TC
Location: 51122 - 52522 (-)
Type: TC
Location: 51122 - 52522 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Species
Citrobacter freundii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.